Index

A

accumulate_metadata() (ChildProject.projects.ChildProject method) AclewMetrics (class in ChildProject.pipelines.metrics) add_parser() (ChildProject.pipelines.metrics.AclewMetrics static method) (ChildProject.pipelines.metrics.CustomMetrics static method) (ChildProject.pipelines.metrics.LenaMetrics static method) (ChildProject.pipelines.processors.AudioProcessor static method) (ChildProject.pipelines.processors.AudioStandard static method) (ChildProject.pipelines.processors.BasicProcessor static method) (ChildProject.pipelines.processors.ChannelMapper static method) (ChildProject.pipelines.processors.VettingProcessor static method) (ChildProject.pipelines.samplers.ConversationSampler static method) (ChildProject.pipelines.samplers.CustomSampler static method) (ChildProject.pipelines.samplers.EnergyDetectionSampler static method) (ChildProject.pipelines.samplers.HighVolubilitySampler static method) (ChildProject.pipelines.samplers.PeriodicSampler static method) (ChildProject.pipelines.samplers.RandomVocalizationSampler static method) (ChildProject.pipelines.samplers.Sampler static method)

ADDRESSEE_TABLE (ChildProject.converters.ChatConverter attribute) ALICE (ChildProject.converters.Formats attribute) AliceConverter (class in ChildProject.converters) AnnotationConverter (class in ChildProject.converters) AnnotationManager (class in ChildProject.annotations) AnonymizationPipeline (class in ChildProject.pipelines.anonymize) assert_columns_presence() (in module ChildProject.tables) assert_dataframe() (in module ChildProject.tables) assert_valid() (ChildProject.pipelines.samplers.Sampler method) AudioProcessingPipeline (class in ChildProject.pipelines.processors) AudioProcessor (class in ChildProject.pipelines.processors) AudioStandard (class in ChildProject.pipelines.processors) avg_can_voc_dur_speaker() (in module ChildProject.pipelines.metricsFunctions) avg_cry_voc_dur_speaker() (in module ChildProject.pipelines.metricsFunctions) avg_non_can_voc_dur_speaker() (in module ChildProject.pipelines.metricsFunctions) avg_voc_dur_speaker() (in module ChildProject.pipelines.metricsFunctions)

B

BasicProcessor (class in ChildProject.pipelines.processors)

C

calculate_shift() (in module ChildProject.utils) can_voc_dur_speaker() (in module ChildProject.pipelines.metricsFunctions) can_voc_dur_speaker_ph() (in module ChildProject.pipelines.metricsFunctions) can_voc_speaker() (in module ChildProject.pipelines.metricsFunctions) can_voc_speaker_ph() (in module ChildProject.pipelines.metricsFunctions) CHA (ChildProject.converters.Formats attribute) ChannelMapper (class in ChildProject.pipelines.processors) ChatConverter (class in ChildProject.converters) check_setup() (ChildProject.pipelines.pipeline.Pipeline method) ChildProject module ChildProject (class in ChildProject.projects) ChildProject.annotations module ChildProject.cmdline module ChildProject.converters module ChildProject.metrics module ChildProject.pipelines module ChildProject.pipelines.anonymize module ChildProject.pipelines.eafbuilder module ChildProject.pipelines.metrics module ChildProject.pipelines.metricsFunctions module ChildProject.pipelines.pipeline module ChildProject.pipelines.processors module ChildProject.pipelines.samplers module

ChildProject.pipelines.zooniverse module ChildProject.projects module ChildProject.tables module ChildProject.templates module ChildProject.utils module CHILDREN_COLUMNS (ChildProject.projects.ChildProject attribute) Chunk (class in ChildProject.pipelines.zooniverse) clip_segments() (ChildProject.annotations.AnnotationManager static method) compute_ages() (ChildProject.projects.ChildProject method) compute_energy_loudness() (ChildProject.pipelines.samplers.EnergyDetectionSampler method) compute_recordings_duration() (ChildProject.projects.ChildProject method) conf_matrix() (in module ChildProject.metrics) ConversationSampler (class in ChildProject.pipelines.samplers) convert() (ChildProject.converters.AliceConverter static method) (ChildProject.converters.ChatConverter static method) (ChildProject.converters.CsvConverter static method) (ChildProject.converters.EafConverter static method) (ChildProject.converters.ItsConverter static method) (ChildProject.converters.TextGridConverter static method) (ChildProject.converters.VcmConverter static method) (ChildProject.converters.VtcConverter static method) cp_dur() (in module ChildProject.pipelines.metricsFunctions) cp_n() (in module ChildProject.pipelines.metricsFunctions) create_eaf() (in module ChildProject.pipelines.eafbuilder) cry_voc_dur_speaker() (in module ChildProject.pipelines.metricsFunctions) cry_voc_dur_speaker_ph() (in module ChildProject.pipelines.metricsFunctions) cry_voc_speaker() (in module ChildProject.pipelines.metricsFunctions) cry_voc_speaker_ph() (in module ChildProject.pipelines.metricsFunctions) CSV (ChildProject.converters.Formats attribute) CsvConverter (class in ChildProject.converters) CustomMetrics (class in ChildProject.pipelines.metrics) CustomSampler (class in ChildProject.pipelines.samplers)

D

DEFAULT_REPLACEMENTS (ChildProject.pipelines.anonymize.AnonymizationPipeline attribute)

derive_annotations() (ChildProject.annotations.AnnotationManager method) DOCUMENTATION_COLUMNS (ChildProject.projects.ChildProject attribute)

E

EAF (ChildProject.converters.Formats attribute) EafBuilderPipeline (class in ChildProject.pipelines.eafbuilder) EafConverter (class in ChildProject.converters) EnergyDetectionSampler (class in ChildProject.pipelines.samplers)

exit_upload() (ChildProject.pipelines.zooniverse.ZooniversePipeline method) export_audio() (ChildProject.pipelines.samplers.Sampler method) export_metadata() (ChildProject.pipelines.processors.AudioProcessor method) extract() (ChildProject.pipelines.metrics.Metrics method) extract_chunks() (ChildProject.pipelines.zooniverse.ZooniversePipeline method)

F

find_lines_involved_in_overlap() (in module ChildProject.utils) FORMAT (ChildProject.converters.AliceConverter attribute) (ChildProject.converters.ChatConverter attribute) (ChildProject.converters.CsvConverter attribute) (ChildProject.converters.EafConverter attribute) (ChildProject.converters.ItsConverter attribute) (ChildProject.converters.TextGridConverter attribute) (ChildProject.converters.VcmConverter attribute) (ChildProject.converters.VtcConverter attribute)

Formats (class in ChildProject.converters)

G

gamma() (in module ChildProject.metrics) get_audio_duration() (in module ChildProject.utils) get_collapsed_segments() (ChildProject.annotations.AnnotationManager method) get_converted_recording_filename() (ChildProject.projects.ChildProject method) get_credentials() (ChildProject.pipelines.zooniverse.ZooniversePipeline method) get_recording_path() (ChildProject.projects.ChildProject method) get_recording_windows() (ChildProject.pipelines.samplers.EnergyDetectionSampler method)

get_recordings_from_list() (ChildProject.projects.ChildProject method) get_segments() (ChildProject.annotations.AnnotationManager method) get_segments_timestamps() (ChildProject.annotations.AnnotationManager method) get_subsets() (ChildProject.annotations.AnnotationManager method) get_within_ranges() (ChildProject.annotations.AnnotationManager method) get_within_time_range() (ChildProject.annotations.AnnotationManager method) getbasename() (ChildProject.pipelines.zooniverse.Chunk method) grid_to_vector() (in module ChildProject.metrics)

H

HighVolubilitySampler (class in ChildProject.pipelines.samplers)

I

import_annotations() (ChildProject.annotations.AnnotationManager method) IncorrectDtypeException INDEX_COLUMNS (ChildProject.annotations.AnnotationManager attribute) IndexColumn (class in ChildProject.tables) IndexTable (class in ChildProject.tables)

intersect_ranges() (in module ChildProject.utils) intersection() (ChildProject.annotations.AnnotationManager static method) is_boolean() (in module ChildProject.tables) ITS (ChildProject.converters.Formats attribute) ItsConverter (class in ChildProject.converters)

L

lena_CTC() (in module ChildProject.pipelines.metricsFunctions) lena_CTC_ph() (in module ChildProject.pipelines.metricsFunctions) lena_CVC() (in module ChildProject.pipelines.metricsFunctions) lena_CVC_ph() (in module ChildProject.pipelines.metricsFunctions) LenaMetrics (class in ChildProject.pipelines.metrics)

length() (ChildProject.utils.Segment method) (ChildProject.utils.TimeInterval method) link_orphan_subjects() (ChildProject.pipelines.zooniverse.ZooniversePipeline method) lp_dur() (in module ChildProject.pipelines.metricsFunctions) lp_n() (in module ChildProject.pipelines.metricsFunctions)

M

merge_annotations() (ChildProject.annotations.AnnotationManager method) merge_sets() (ChildProject.annotations.AnnotationManager method) metricFunction() (in module ChildProject.pipelines.metricsFunctions) Metrics (class in ChildProject.pipelines.metrics) MetricsPipeline (class in ChildProject.pipelines.metrics) MetricsSpecificationPipeline (class in ChildProject.pipelines.metrics) MissingColumnsException module ChildProject ChildProject.annotations ChildProject.cmdline ChildProject.converters ChildProject.metrics ChildProject.pipelines ChildProject.pipelines.anonymize ChildProject.pipelines.eafbuilder ChildProject.pipelines.metrics ChildProject.pipelines.metricsFunctions ChildProject.pipelines.pipeline ChildProject.pipelines.processors ChildProject.pipelines.samplers ChildProject.pipelines.zooniverse ChildProject.projects ChildProject.tables ChildProject.templates ChildProject.utils

msg() (ChildProject.tables.IndexTable method)

N

non_can_voc_dur_speaker() (in module ChildProject.pipelines.metricsFunctions) non_can_voc_dur_speaker_ph() (in module ChildProject.pipelines.metricsFunctions)

non_can_voc_speaker() (in module ChildProject.pipelines.metricsFunctions) non_can_voc_speaker_ph() (in module ChildProject.pipelines.metricsFunctions)

O

output_directory() (ChildProject.pipelines.processors.AudioProcessor method)

P

pad_interval() (in module ChildProject.pipelines.zooniverse) path_is_parent() (in module ChildProject.utils) pc_adu() (in module ChildProject.pipelines.metricsFunctions) pc_adu_ph() (in module ChildProject.pipelines.metricsFunctions) pc_speaker() (in module ChildProject.pipelines.metricsFunctions) pc_speaker_ph() (in module ChildProject.pipelines.metricsFunctions) peak_can_voc_dur_speaker() (in module ChildProject.pipelines.metricsFunctions) peak_can_voc_speaker() (in module ChildProject.pipelines.metricsFunctions) peak_cry_voc_dur_speaker() (in module ChildProject.pipelines.metricsFunctions) peak_cry_voc_speaker() (in module ChildProject.pipelines.metricsFunctions) peak_hour_metric() (in module ChildProject.pipelines.metricsFunctions) peak_lena_CTC() (in module ChildProject.pipelines.metricsFunctions) peak_lena_CVC() (in module ChildProject.pipelines.metricsFunctions) peak_non_can_voc_dur_speaker() (in module ChildProject.pipelines.metricsFunctions) peak_non_can_voc_speaker() (in module ChildProject.pipelines.metricsFunctions) peak_pc_adu() (in module ChildProject.pipelines.metricsFunctions) peak_pc_speaker() (in module ChildProject.pipelines.metricsFunctions)

peak_sc_adu() (in module ChildProject.pipelines.metricsFunctions) peak_sc_speaker() (in module ChildProject.pipelines.metricsFunctions) peak_simple_CTC() (in module ChildProject.pipelines.metricsFunctions) peak_voc_dur_speaker() (in module ChildProject.pipelines.metricsFunctions) peak_voc_speaker() (in module ChildProject.pipelines.metricsFunctions) peak_wc_adu() (in module ChildProject.pipelines.metricsFunctions) peak_wc_speaker() (in module ChildProject.pipelines.metricsFunctions) per_hour_metric() (in module ChildProject.pipelines.metricsFunctions) PeriodicSampler (class in ChildProject.pipelines.samplers) Pipeline (class in ChildProject.pipelines.pipeline) process() (ChildProject.pipelines.processors.AudioProcessor method) process_recording() (ChildProject.pipelines.processors.AudioProcessor method) (ChildProject.pipelines.processors.AudioStandard method) (ChildProject.pipelines.processors.BasicProcessor method) (ChildProject.pipelines.processors.ChannelMapper method) (ChildProject.pipelines.processors.VettingProcessor method) pyannote_metric() (in module ChildProject.metrics)

R

RandomVocalizationSampler (class in ChildProject.pipelines.samplers) read() (ChildProject.annotations.AnnotationManager method) (ChildProject.projects.ChildProject method) (ChildProject.tables.IndexTable method) read_csv_with_dtype() (in module ChildProject.tables) read_documentation() (ChildProject.projects.ChildProject method) read_metadata() (ChildProject.pipelines.processors.AudioProcessor method) read_wav() (in module ChildProject.utils) REC_COL_REF (ChildProject.projects.ChildProject attribute) recording_from_path() (ChildProject.projects.ChildProject method) RECORDINGS_COLUMNS (ChildProject.projects.ChildProject attribute) recordings_from_list() (ChildProject.pipelines.pipeline.Pipeline static method) remove_excluded() (ChildProject.pipelines.samplers.Sampler method) remove_set() (ChildProject.annotations.AnnotationManager method) rename_set() (ChildProject.annotations.AnnotationManager method)

REQUIRED_DIRECTORIES (ChildProject.projects.ChildProject attribute) reset_orphan_subjects() (ChildProject.pipelines.zooniverse.ZooniversePipeline method) retrieve_classifications() (ChildProject.pipelines.zooniverse.ZooniversePipeline method) retrieve_segments() (ChildProject.pipelines.metrics.Metrics method) (ChildProject.pipelines.samplers.Sampler method) retry_func() (in module ChildProject.utils) role_to_addressee() (ChildProject.converters.ChatConverter static method) run() (ChildProject.pipelines.anonymize.AnonymizationPipeline method) (ChildProject.pipelines.eafbuilder.EafBuilderPipeline method) (ChildProject.pipelines.metrics.MetricsPipeline method) (ChildProject.pipelines.metrics.MetricsSpecificationPipeline method) (ChildProject.pipelines.pipeline.Pipeline method) (ChildProject.pipelines.processors.AudioProcessingPipeline method) (ChildProject.pipelines.samplers.SamplerPipeline method) (ChildProject.pipelines.zooniverse.ZooniversePipeline method)

S

sample() (ChildProject.pipelines.samplers.Sampler method) Sampler (class in ChildProject.pipelines.samplers) SamplerPipeline (class in ChildProject.pipelines.samplers) sc_adu() (in module ChildProject.pipelines.metricsFunctions) sc_adu_ph() (in module ChildProject.pipelines.metricsFunctions) sc_speaker() (in module ChildProject.pipelines.metricsFunctions) sc_speaker_ph() (in module ChildProject.pipelines.metricsFunctions) Segment (class in ChildProject.utils) SEGMENTS_COLUMNS (ChildProject.annotations.AnnotationManager attribute) segments_to_annotation() (in module ChildProject.metrics) segments_to_grid() (in module ChildProject.metrics) series_to_datetime() (in module ChildProject.utils) set_from_path() (ChildProject.annotations.AnnotationManager method) setup() (ChildProject.pipelines.pipeline.Pipeline method) setup_parser() (ChildProject.pipelines.anonymize.AnonymizationPipeline static method) (ChildProject.pipelines.eafbuilder.EafBuilderPipeline static method) (ChildProject.pipelines.metrics.MetricsPipeline static method) (ChildProject.pipelines.metrics.MetricsSpecificationPipeline static method) (ChildProject.pipelines.processors.AudioProcessingPipeline static method) (ChildProject.pipelines.samplers.SamplerPipeline static method) (ChildProject.pipelines.zooniverse.ZooniversePipeline static method)

setup_pipeline() (ChildProject.pipelines.pipeline.Pipeline static method) simple_CTC() (in module ChildProject.pipelines.metricsFunctions) simple_CTC_ph() (in module ChildProject.pipelines.metricsFunctions) SPEAKER_ID_TO_TYPE (ChildProject.converters.AnnotationConverter attribute) SPEAKER_ROLE_TO_TYPE (ChildProject.converters.ChatConverter attribute) SPEAKER_TYPE_TRANSLATION (ChildProject.converters.ItsConverter attribute) (ChildProject.converters.VcmConverter attribute) (ChildProject.converters.VtcConverter attribute) SUBCOMMAND (ChildProject.pipelines.metrics.AclewMetrics attribute) (ChildProject.pipelines.metrics.CustomMetrics attribute) (ChildProject.pipelines.metrics.LenaMetrics attribute) (ChildProject.pipelines.processors.AudioStandard attribute) (ChildProject.pipelines.processors.BasicProcessor attribute) (ChildProject.pipelines.processors.ChannelMapper attribute) (ChildProject.pipelines.processors.VettingProcessor attribute) (ChildProject.pipelines.samplers.ConversationSampler attribute) (ChildProject.pipelines.samplers.CustomSampler attribute) (ChildProject.pipelines.samplers.EnergyDetectionSampler attribute) (ChildProject.pipelines.samplers.HighVolubilitySampler attribute) (ChildProject.pipelines.samplers.PeriodicSampler attribute) (ChildProject.pipelines.samplers.RandomVocalizationSampler attribute)

T

TEXTGRID (ChildProject.converters.Formats attribute) TextGridConverter (class in ChildProject.converters) THREAD_SAFE (ChildProject.converters.AnnotationConverter attribute) (ChildProject.converters.ChatConverter attribute)

time_intervals_intersect() (in module ChildProject.utils) TimeInterval (class in ChildProject.utils)

U

upload_chunks() (ChildProject.pipelines.zooniverse.ZooniversePipeline method)

V

validate() (ChildProject.annotations.AnnotationManager method) (ChildProject.projects.ChildProject method) (ChildProject.tables.IndexTable method) validate_annotation() (ChildProject.annotations.AnnotationManager method) VCM (ChildProject.converters.Formats attribute) VCM_TRANSLATION (ChildProject.converters.VcmConverter attribute) VcmConverter (class in ChildProject.converters)

vectors_to_annotation_task() (in module ChildProject.metrics) VettingProcessor (class in ChildProject.pipelines.processors) voc_dur_speaker() (in module ChildProject.pipelines.metricsFunctions) voc_dur_speaker_ph() (in module ChildProject.pipelines.metricsFunctions) voc_speaker() (in module ChildProject.pipelines.metricsFunctions) voc_speaker_ph() (in module ChildProject.pipelines.metricsFunctions) VTC (ChildProject.converters.Formats attribute) VtcConverter (class in ChildProject.converters)

W

wc_adu() (in module ChildProject.pipelines.metricsFunctions) wc_adu_ph() (in module ChildProject.pipelines.metricsFunctions) wc_speaker() (in module ChildProject.pipelines.metricsFunctions)

wc_speaker_ph() (in module ChildProject.pipelines.metricsFunctions) write() (ChildProject.annotations.AnnotationManager method) write_recordings() (ChildProject.projects.ChildProject method)

Z

ZooniversePipeline (class in ChildProject.pipelines.zooniverse)